diff --git a/+tests/+rfc/save.m b/+tests/+rfc/save.m
index 3f601ba8c6251e21320f429833f277a971336017..fc84fc6bebbf3bbe0d905aef6635b61a02161637 100644
--- a/+tests/+rfc/save.m
+++ b/+tests/+rfc/save.m
@@ -8,25 +8,90 @@ function [success] = save()
dataFileName = fullfile(currentDirectory, '..', 'data', '0272.rfb');
rfb = artoa.load.rfb(dataFileName);
+% load test mat file exported from old version of artoa3
+load(fullfile(currentDirectory, '..', 'data', 'rfc_0272_trackdata.mat'));
+track = 2;
+
+% get global variables that have been imported from the track data
+global TEMP_REF TEMP_DATE TEMP_DEL TEMP_SEL TEMP PRES_DEL PRES_SEL PRES
+global TRAJ afoffbeg afoffend
% IFLAG MESSAGE_NUMBER MESSAGE_DATE TEMP PRES LAT LON u v w
-lineCount = size(rfb.DATA, 1);
+lineCount = size(TEMP_REF, 1);
data = [];
data(:, 1) = repmat(999, lineCount, 1);
-data(:, 2) = rfb.DATA(1:lineCount, rfb.VARIABLE_LIST.line_number);
-data(:, 3) = artoa.convert.dmy2rd(rfb.DATA(:, 4), rfb.DATA(:, 3), rfb.DATA(:, 2));% + artoa.convert.hms2rd(rfb.DATA(:, 5), rfb.DATA(:, 6), rfb.DATA(:, 7));
-data(:, 4) = rfb.DATA(1:lineCount, rfb.VARIABLE_LIST.temperature);
-data(:, 5) = rfb.DATA(1:lineCount, rfb.VARIABLE_LIST.pressure);
+data(:, 2) = TEMP_REF;
+data(:, 3) = TEMP_DATE;
+data(:, 4) = repmat(-9.99, lineCount, 1);
+indices = (~TEMP_DEL&(TEMP_SEL~=0));
+data(indices, 4) = TEMP(indices);
+data(:, 5) = repmat(-999, lineCount, 1);
+indices = (~PRES_DEL&(PRES_SEL~=0));
+data(indices, 5) = PRES(indices);
data(:, 6) = repmat(999, lineCount, 1);
data(:, 7) = repmat(999, lineCount, 1);
data(:, 8) = repmat(999, lineCount, 1);
data(:, 9) = NaN(1, lineCount);
data(:, 10) = repmat(999, lineCount, 1);
+
+%% RFC without trajectory
saveToFilename = fullfile(currentDirectory, '..', 'data', 'testOutput.rfc');
success = artoa.save.rfc(saveToFilename, rfb.FLOAT, data);
+%% Setup trajectory object
+
+trajectory = struct();
+trajectory.trackingMethod = TRAJ(track).tmethod;
+trajectory.interval = TRAJ(track).interval;
+trajectory.gapSize = TRAJ(track).gapsize;
+trajectory.interpolationMethod = TRAJ(track).imethod;
+trajectory.soundSpeedMethod = TRAJ(track).ssmethod;
+trajectory.dopplerCorrection = TRAJ(track).doppler;
+trajectory.velocityMethod = TRAJ(track).vmethod;
+trajectory.status = TRAJ(track).status;
+trajectory.toa = TRAJ(track).toa;
+trajectory.toaDate = TRAJ(track).toa_date;
+trajectory.toaSel = TRAJ(track).toa_sel;
+trajectory.toaIntp = TRAJ(track).toa_intp;
+trajectory.latitude = TRAJ(track).lat;
+trajectory.longitude = TRAJ(track).lon;
+trajectory.date = TRAJ(track).date;
+trajectory.pressure = TRAJ(track).pres;
+trajectory.temperature = TRAJ(track).temp;
+trajectory.iflag = TRAJ(track).iflag;
+trajectory.clockError = TRAJ(track).clockerror;
+trajectory.misfits = TRAJ(track).misfits;
+trajectory.residualsPlotted = TRAJ(track).plotresiduals;
+trajectory.velocityTotal = TRAJ(track).vtot;
+trajectory.velocityLatitude = TRAJ(track).vlat;
+trajectory.velocityLongitude = TRAJ(track).vlon;
+trajectory.velocityVertical = TRAJ(track).vvert;
+trajectory.velocityVerticalDate = TRAJ(track).vvert_date;
+trajectory.additionalFloatOffsetBegin = afoffbeg;
+trajectory.additionalFloatOffsetEnd = afoffend;
+
+% create soundSourceCombination struct
+sourceCombination = struct();
+for i = 1:length(TRAJ(track).comb)
+ sourceCombination(i).sources = TRAJ(track).comb(i).sources;
+ sourceCombination(i).begin = TRAJ(track).comb(i).begin;
+ sourceCombination(i).end = TRAJ(track).comb(i).end;
+ sourceCombination(i).referencePosition = TRAJ(track).comb(i).refpos;
+ sourceCombination(i).soundSpeed = TRAJ(track).comb(i).soundspeed;
+end
+
+% add it to the trajectory
+trajectory.soundSources = sourceCombination;
+
+
+
+%% RFC including trajectory
+saveToFilename = fullfile(currentDirectory, '..', 'data', 'testOutputIncludingTrajectory.rfc');
+
+success = success && artoa.save.rfc(saveToFilename, rfb.FLOAT, data, trajectory);
+
end
diff --git a/+tests/0272.rfc b/+tests/0272.rfc
new file mode 100644
index 0000000000000000000000000000000000000000..2762c7a988d68345e6439a57ae0747e56304e8bb
--- /dev/null
+++ b/+tests/0272.rfc
@@ -0,0 +1,403 @@
+** Float: Ä
+** variables : InterpFlag LineNum RafosDay Temp Pres Lat Lon U V W
+** Units : # # # degC dbar deg deg cm/s cm/s mm/s
+** Dummies : NA NA NA -9.99 -999 999 999 999 999 999
+** Cycle: 1
+** Launch position (Cycle Start position): -68.99 -27.97
+** Surface position (Cycle End position) : -66.35 -44.45
+** Cycle Start time : 2017 1 14 5 8 0 (RAFOS day 6223.2139)
+** Launch time : 2017 1 14 5 8 0 (RAFOS day 6223)
+** Cycle End time : 2018 2 7 10 54 0 (RAFOS day 6612.4542)
+** First surface Position time : 2018 2 7 10 54 0 (RAFOS day 6612)
+** -------
+ * No trajectory information, flt not tracked.
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diff --git a/+tests/0272_including_trajectory.rfc b/+tests/0272_including_trajectory.rfc
new file mode 100644
index 0000000000000000000000000000000000000000..21152514d2cc8ad101fce6c924c913421e043d72
--- /dev/null
+++ b/+tests/0272_including_trajectory.rfc
@@ -0,0 +1,419 @@
+** Float: Ä
+** variables : InterpFlag LineNum RafosDay Temp Pres Lat Lon U V W
+** Units : # # # degC dbar deg deg cm/s cm/s mm/s
+** Dummies : NA NA NA -9.99 -999 999 999 999 999 999
+** Cycle: 1
+** Launch position (Cycle Start position): -68.99 -27.97
+** Surface position (Cycle End position) : -66.35 -44.45
+** Cycle Start time : 2017 1 14 5 8 0 (RAFOS day 6223.2139)
+** Launch time : 2017 1 14 5 8 0 (RAFOS day 6223)
+** Cycle End time : 2018 2 7 10 54 0 (RAFOS day 6612.4542)
+** First surface Position time : 2018 2 7 10 54 0 (RAFOS day 6612)
+** Float clock offset (init/final) : 0 / 7 seconds
+** -------
+** Tracking method: Least Square
+** Interpolation method: Spline
+** Interpolation step size: 24 hours
+** Interpolation gap size: 10
+** Doppler correction: yes
+** -------
+** Sound source combinations: (rafos day, sound sources, reference position, sound speed)
+** 6230 to 6404: W4e W13b 1.464 1.464 1.464 1.464 1.464
+** 6405 to 6409: W13b W5d Track 0 0 0 1.464 1.464
+** 6410 to 6463: W5d W14a Track 1.464 1.464 1.464 1.464 1.464
+** 6464 to 6565: Wd5 W14a 10 1.464 1.464 1.464 1.464 1.464
+** 6566 to 6611: W13b W4e 1.464 1.464 1.464 1.464 1.464
+** -------
+** Additional Float clock offsets, seconds (beginning, end): 51 67
+** -------
+ * l ----------
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diff --git a/+tests/data/rfc_0272_trackdata.mat b/+tests/data/rfc_0272_trackdata.mat
new file mode 100644
index 0000000000000000000000000000000000000000..de98dd7af73ff0d028c67dfe0bed17e650bca0e0
Binary files /dev/null and b/+tests/data/rfc_0272_trackdata.mat differ
diff --git a/lib/+artoa/+save/rfc.m b/lib/+artoa/+save/rfc.m
index f187cd81e80207e172edbc5c77ea66fa47b54ba8..4823891055a11d2de7d9f35c12a122875b819994 100644
--- a/lib/+artoa/+save/rfc.m
+++ b/lib/+artoa/+save/rfc.m
@@ -1,4 +1,4 @@
-function [ success ] = rfc(pFilename, pFloatDetails, pData)
+function [ success ] = rfc(pFilename, pFloatDetails, pData, pTrajectory)
%RFC Saves the given data to the filename in RFC format.
%
% Parameters:
@@ -9,6 +9,8 @@ function [ success ] = rfc(pFilename, pFloatDetails, pData)
% Each line contains one set of data. The matrix format needs to
% be the following:
% IFLAG MESSAGE_NUMBER MESSAGE_DATE TEMP PRES LAT LON u v w
+% pTrajectory (struct) The trajectory data according to the memory
+% data format specification, see projects wiki.
%% Initialize return variables
@@ -16,11 +18,14 @@ success = false;
%% Initialize variables required for processing
headerLineIndicator = "** ";
+headerString = '';
+dataString = '';
%% Parameter check
parameterError = false;
+
if (~isstring(pFilename) && ~ischar(pFilename))
warning([mfilename ': Given filename is neither a string nor a char!']);
parameterError = true;
@@ -100,7 +105,7 @@ header = { ...
['** Launch position (Cycle Start position): ' ...
launchPositionLat ' ' launchPositionLon], ...
['** Surface position (Cycle End position) : ' ...
- surfacePositionLat ' ' surfacePositionLat], ...
+ surfacePositionLat ' ' surfacePositionLon], ...
['** Cycle Start time : ' floatCycleStartTime ' (RAFOS day ' floatCycleStartTimeRafosDays ')'], ...
['** Launch time : ' launchTime ' (RAFOS day ' launchTimeRafosDays ')'], ...
['** Cycle End time : ' floatCycleEndTime ' (RAFOS day ' floatCycleEndTimeRafosDays ')'], ...
@@ -109,10 +114,10 @@ header = { ...
['** -------'] ...
};
-fileString = [strjoin(header, newline) newline];
+headerString = strjoin(header, newline);
-%% Generate file format
+%% COLLECT DATA STRING
for i = 1:size(pData, 1)
line = { ...
@@ -127,17 +132,82 @@ for i = 1:size(pData, 1)
num2str(pData(i, 9), '%7.2f') ...
num2str(pData(i, 10), '%7.2f')
};
- fileString = [fileString strjoin(line) newline];
+ dataString = [dataString strjoin(line) newline];
end
-%% Save to file
+%% IF NO TRAJECTORY AVAILABLE
+if (nargin == 3)
+ headerString = [headerString newline ' * No trajectory information, flt not tracked.' newline];
+ saveToFile(pFilename, headerString, dataString);
+ success = true;
+ return;
+elseif (~isstruct(pTrajectory))
+ warning('Trajectory variable is not a struct. It will NOT be used!');
+end
-fid = fopen(pFilename, 'w');
-fprintf(fid, fileString);
-fclose(fid);
+%% TRAJECTORY IS AVAILABLE
+if (pTrajectory.dopplerCorrection == 1)
+ dopplerCorrectionUsed = 'yes';
+else
+ dopplerCorrectionUsed = 'no';
+end
-%% Update return variable
+trajectoryHeader = { ...
+ ['** Tracking method: ' char(pTrajectory.trackingMethod)], ...
+ ['** Interpolation method: ' char(pTrajectory.interpolationMethod)], ...
+ ['** Interpolation step size: ' num2str(pTrajectory.interval) ' hours'], ...
+ ['** Interpolation gap size: ' num2str(pTrajectory.gapSize)], ...
+ ['** Doppler correction: ' dopplerCorrectionUsed], ...
+ ['** -------'], ...
+ ['** Sound source combinations: (rafos day, sound sources, reference position, sound speed)'] ...
+};
+
+trajectoryHeader = strjoin(trajectoryHeader, newline);
+
+soundSourcesHeader = '';
+for i = 1:length(pTrajectory.soundSources)
+ currentCombination = pTrajectory.soundSources(i);
+ soundSourcesHeader = [ ...
+ soundSourcesHeader ...
+ '** ' num2str(currentCombination.begin) ' to ' num2str(currentCombination.end) ': ' ...
+ strjoin(currentCombination.sources, ' ') ' ' ...
+ num2str(currentCombination.referencePosition) ' ' ...
+ num2str(currentCombination.soundSpeed) ...
+ newline ...
+ ];
+end
+
+soundSourcesHeader = [ ...
+ soundSourcesHeader ...
+ '** -------' newline ...
+ '** Additional Float clock offsets, seconds (beginning, end): ' ...
+ num2str(pTrajectory.additionalFloatOffsetBegin) ...
+ ' ' ...
+ num2str(pTrajectory.additionalFloatOffsetEnd) newline ...
+ '** -------' newline ...
+ ' * l ----------' ...
+];
+
+headerString = [ ...
+ headerString newline...
+ trajectoryHeader newline ...
+ soundSourcesHeader newline ...
+];
+%% Save to file
+saveToFile(pFilename, headerString, dataString);
+
+%% Update return variable
success = true;
+
+%% Nested functions
+
+ function saveToFile(pFilename, pHeader, pData)
+ fid = fopen(pFilename, 'w');
+ fprintf(fid, pHeader);
+ fprintf(fid, pData);
+ fclose(fid);
+ end
+
end